Index

A

axpy() (in module monalisa.optim)

B

back_gradient() (in module monalisa.optim) back_gradient_n() (in module monalisa.optim)

back_gradient_n_t() (in module monalisa.optim) back_gradient_t() (in module monalisa.optim) block_reshape() (in module monalisa.array)

C

cell_to_array() (in module monalisa.array) check() (SparseMat method) check_dir() (in module monalisa.io) check_metadata_interactive() (in module monalisa.io) coil_sense_non_cart_data() (in module monalisa.coil) coil_sense_non_cart_mask_automatic() (in module monalisa.coil) coil_sense_non_cart_primary() (in module monalisa.coil) coil_sense_non_cart_ref() (in module monalisa.coil)

coil_sense_non_cart_secondary() (in module monalisa.coil) coil_sense_pinv() (in module monalisa.coil) col() (in module monalisa.array) col_reshape() (in module monalisa.array) correct_metadata_interactive() (in module monalisa.io) cpp_prepare() (SparseMat method) create_dir() (in module monalisa.io) create_raw_data_reader() (in module monalisa.io) csr() (SparseMat method)

D

deapodization() (in module monalisa.fourier) default_grid() (in module monalisa.util) default_kernel() (in module monalisa.util) default_sparse_type() (in module monalisa.util) detect_roi() (in module monalisa.coil)

dft1() (in module monalisa.fourier) dft1_conj_trans() (in module monalisa.fourier) dft2() (in module monalisa.fourier) dft2_conj_trans() (in module monalisa.fourier) dft3() (in module monalisa.fourier) dft3_conj_trans() (in module monalisa.fourier)

E

euclidean_prod() (in module monalisa.optim)

F

fc() (in module monalisa.fourier) fc_conj() (in module monalisa.fourier) find_function() (in module monalisa)

from_matlab_fields() (MriAcquisitionParam class method) (RawDataReader class method) (SparseMat class method) (WitnessInfo class method)

G

gridder_n2u_leight() (in module monalisa.gridding)

I

idf() (in module monalisa.fourier) idf1() (in module monalisa.fourier) idf1_conj_trans() (in module monalisa.fourier) idf2() (in module monalisa.fourier) idf2_conj_trans() (in module monalisa.fourier) idf3() (in module monalisa.fourier) idf3_conj_trans() (in module monalisa.fourier) im_crop() (in module monalisa.image) im_deform() (in module monalisa.image) im_deform_field_chain_im_reg_demons23() (in module monalisa.registration) im_deform_field_hard_thresholding2() (in module monalisa.image) im_deform_field_sheet_im_reg_demons23() (in module monalisa.registration) im_deform_field_to_sparse_mat() (in module monalisa.gridding) im_deform_field_to_sparse_mat_ind_weight() (in module monalisa.gridding) im_deform_t() (in module monalisa.image) im_dim() (in module monalisa.image)

im_laplace_equation_solver() (in module monalisa.image) im_laplace_iterator() (in module monalisa.image) im_laplacian() (in module monalisa.image) im_pseudo_diffusion() (in module monalisa.image) im_pseudo_diffusion_in_mask() (in module monalisa.image) im_reshape() (in module monalisa.image) im_resize() (in module monalisa.image) im_zero_fill() (in module monalisa.image) index_to_multi_index() (in module monalisa.array) initial_witness_info() (in module monalisa.optim) is_block_shape() (in module monalisa.array) is_col_shape() (in module monalisa.array) is_scalar() (in module monalisa.array) ismrmrd_read_meta_data() (in module monalisa.io) ismrmrd_read_raw_data() (in module monalisa.io) IsmrmrdReader (class in monalisa.io)

K

kf() (in module monalisa.fourier)

kf_conj() (in module monalisa.fourier)

L

l_squeeze() (SparseMat method)

loadmat73() (in module monalisa.io) low_res() (in module monalisa.trajectory)

M

mathilda() (in module monalisa.recon) minus() (in module monalisa.optim) mip() (in module monalisa.image) mitosis() (in module monalisa.binning) mitosius_create() (in module monalisa.binning) mitosius_load() (in module monalisa.binning) module monalisa.array monalisa.binning monalisa.coil monalisa.display monalisa.fourier monalisa.geometry monalisa.gridding monalisa.image monalisa.io monalisa.optim monalisa.recon monalisa.registration monalisa.sparse monalisa.trajectory monalisa.util monalisa.array module monalisa.binning module monalisa.coil module

monalisa.display module monalisa.fourier module monalisa.geometry module monalisa.gridding module monalisa.image module monalisa.io module monalisa.MATLAB_NAMES (built-in variable) monalisa.optim module monalisa.recon module monalisa.registration module monalisa.sparse module monalisa.trajectory module monalisa.util module MriAcquisitionParam (class in monalisa.io) mult() (in module monalisa.optim)

N

nakatsha() (in module monalisa.fourier)

nakatsha_matlab() (in module monalisa.fourier) nasha() (in module monalisa.recon)

P

parity_fields() (MriAcquisitionParam method) (SparseMat method) (WitnessInfo method) permute_to_col() (in module monalisa.array) permute_to_point() (in module monalisa.array)

phyllotaxis_angle3() (in module monalisa.trajectory) plus() (in module monalisa.optim) point_reshape() (in module monalisa.array) poly2mask() (in module monalisa.display) prox_one_norm() (in module monalisa.optim)

R

RawDataReader (class in monalisa.io) read_meta_data() (IsmrmrdReader method) (RawDataReader method) (SiemensReader method) read_raw_data() (IsmrmrdReader method) (RawDataReader method) (SiemensReader method)

refresh() (MriAcquisitionParam method) rms() (in module monalisa.image) roipoly() (in module monalisa.display)

S

savemat73() (in module monalisa.io) select_roi() (in module monalisa.coil) sensa() (in module monalisa.recon) sensitiva_morphosia_chain() (in module monalisa.recon) shanna() (in module monalisa.fourier) shanna_matlab() (in module monalisa.fourier) show_image() (in module monalisa.display) siemens_read_meta_data() (in module monalisa.io) siemens_read_raw_data() (in module monalisa.io)

SiemensReader (class in monalisa.io) sleva() (in module monalisa.recon) sparse_mat_block_partition() (in module monalisa.sparse) sparse_mat_complete_matlab_sparse() (in module monalisa.sparse) sparse_mat_from_matlab_sparse() (in module monalisa.sparse) sparse_mat_r_n_jump_to_index() (in module monalisa.sparse) sparse_mat_vec() (in module monalisa.sparse) SparseMat (class in monalisa.sparse) squared_norm() (in module monalisa.optim) steva() (in module monalisa.recon)

T

teva_duo_morphosia_chain() (in module monalisa.recon) teva_morphosia_chain() (in module monalisa.recon) threshold_rms_mip() (in module monalisa.coil) time_in_second() (in module monalisa.util) to_single() (in module monalisa.array) traj() (in module monalisa.trajectory) traj_format() (in module monalisa.trajectory) traj_full_radial3_phyllotaxis_line_assym2() (in module monalisa.trajectory)

traj_grid() (in module monalisa.trajectory) traj_grid_size() (in module monalisa.trajectory) traj_grid_step() (in module monalisa.trajectory) traj_line_direction() (in module monalisa.trajectory) traj_line_reshape() (in module monalisa.trajectory) traj_n_line() (in module monalisa.trajectory) traj_norm() (in module monalisa.trajectory) traj_squared_norm() (in module monalisa.trajectory) traj_to_sparse_mat() (in module monalisa.gridding)

V

varargin() (in module monalisa.util) volume_element() (in module monalisa.geometry) volume_element1() (in module monalisa.geometry) volume_element_cartesian2() (in module monalisa.geometry) volume_element_center_out_radial3() (in module monalisa.geometry) volume_element_full_radial3() (in module monalisa.geometry)

volume_element_random_partial_cartesian2_x() (in module monalisa.geometry) volume_element_random_partial_cartesian3_x() (in module monalisa.geometry) volume_element_voronoi_box2() (in module monalisa.geometry) volume_element_voronoi_center_out_radial2() (in module monalisa.geometry) volume_element_voronoi_full_radial2() (in module monalisa.geometry) volume_element_voronoi_full_radial3() (in module monalisa.geometry) voronoi() (in module monalisa.geometry)

W

watch() (WitnessInfo method)

WitnessInfo (class in monalisa.optim)

Y

y_norm() (in module monalisa.optim)

y_ve_reshape() (in module monalisa.optim)

Z

zero() (in module monalisa.array)

↑